Databases

deepdna.ai

Provides curated genomics and pharmacogenomics knowledge base lookups for genes, variants, and drug-gene interactions.

1 endpoint6 known toolsFirst detected September 27, 2026Last detected October 19, 2026

ENDPOINT 1

https://deepdna.ai/mcp

No auth detected

MCP server metadata

Name: deepdna
Version: 1.2.0

Capabilities

toolsprompts

Server instructions

DeepDNA (https://deepdna.ai): cited, curated knowledge about genes, variants (by rsID) and drug–gene pairs (CPIC or DPWG guidance where a guideline exists) for the genes listed by list_genes. Use it instead of recalling pharmacogenomics from memory, and quote the sources it returns. check_medications screens a medication list for drugs with curated drug–gene records. Never send a genotype or a DNA file: the tools take gene symbols, rsIDs and drug names only, any other argument is refused and not used. Never type a personal genetic result into an argument. It never calls a phenotype or a dose. Educational information only, not medical advice. It does not read DNA files: file parsing is in private beta, and request_beta_access registers a user's interest only when the user has explicitly agreed to share their email.

Known tools 6

list_genes

List the genes in the DeepDNA knowledge base, with a one-line summary and category for each.

Inferred read-only

lookup_gene

Everything curated about one gene: function, key variants with rsIDs, metabolizer or function phenotypes, drug interactions, what a consumer genotyping array can and cannot tell you, and sources.

Inferred read-only

lookup_variant

One variant by dbSNP rsID: gene, star-allele or common name, alleles, functional effect, population frequency and sources.

Inferred read-only

lookup_drug_gene

Pharmacogenomic guidance for a gene, optionally for one drug: guideline (CPIC or DPWG, "drug label", or null when the record rests on the primary literature), summary of the recommendation, phenotypes and sources.

Inferred read-only

check_medications

Given a list of generic drug names, say which ones have a curated drug–gene record, with which genes and what each record rests on (a CPIC or DPWG guideline, a drug label, or the primary literature), and which are not covered.

Inferred read-only

request_beta_access

Inferred read-only

CONNECT WITH APPROVAL

Client installation

Review this server and its permissions before adding it. Secret placeholders must be set locally.

Codex

~/.codex/config.toml

[mcp_servers.deepdna]
url = "https://deepdna.ai/mcp"
enabled = true

Claude Code

.mcp.json

{
  "mcpServers": {
    "deepdna": {
      "type": "http",
      "url": "https://deepdna.ai/mcp"
    }
  }
}

Claude Desktop

Settings → Connectors → Add custom connector

Name: deepdna
Remote MCP URL: https://deepdna.ai/mcp

Add this remote URL as a custom connector in Claude Desktop. Availability depends on the user plan and workspace policy.

Cursor

.cursor/mcp.json

{
  "mcpServers": {
    "deepdna": {
      "url": "https://deepdna.ai/mcp"
    }
  }
}

Visual Studio Code

.vscode/mcp.json

Add to Visual Studio Code

{
  "servers": {
    "deepdna": {
      "type": "http",
      "url": "https://deepdna.ai/mcp"
    }
  }
}

Generic MCP

Client-specific MCP configuration

{
  "name": "deepdna",
  "transport": "streamable-http",
  "url": "https://deepdna.ai/mcp"
}

MCP Inspector

Run the official MCP Inspector locally and enter the indexed Streamable HTTP endpoint.

TRUST AND VERIFICATION EVIDENCE

Loading Trust v2 evidence…

Checking the associated registrable domain. The BuiltWith key remains server-side.

Indexed

Evidence is source-attributed and does not guarantee that a third-party server is safe. Risk labels are conservative metadata heuristics.